STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HBP1HMG-box transcription factor 1. (519 aa)    
Predicted Functional Partners:
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.845
DUS4L
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
      
 0.633
G1TZ09_RABIT
Sin3a_C domain-containing protein.
   
 
 0.611
ENSOCUP00000045227
Uncharacterized protein.
   
 
 0.611
C1orf105
Chromosome 1 open reading frame 105.
      
 0.586
MTIF2
Mitochondrial translational initiation factor 2.
      
 0.585
RNF11
Ring finger protein 11.
   
  
 0.581
GPR22
G protein-coupled receptor 22.
      
 0.489
ATXN1
Ataxin 1.
    
 
0.476
MAP3K10
Mitogen-activated protein kinase kinase kinase.
    
 
 0.472
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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