STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1Uncharacterized protein. (2465 aa)    
Predicted Functional Partners:
PKD2
Polycystin 2, transient receptor potential cation channel.
 
  
 0.999
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.933
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
 
  
 0.888
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
 
  
 0.737
IFT88
Intraflagellar transport 88.
      
 0.736
NEK8
NIMA related kinase 8.
      
 0.722
KIF3A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.714
TSC2
TSC complex subunit 2.
   
  
 0.714
IFT20
Intraflagellar transport 20.
      
 0.664
TRPV4
Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
  
 0.653
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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