STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBX2Gastrulation brain homeobox 2. (344 aa)    
Predicted Functional Partners:
WNT1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 
 0.810
PAX2
Paired box 2.
    
 
 0.702
OLIG3
Oligodendrocyte transcription factor 3.
   
  
 0.671
ESRRB
Estrogen related receptor beta.
    
 
 0.658
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.621
OTX2
Orthodenticle homeobox 2.
      
0.620
TFCP2L1
Transcription factor CP2 like 1.
    
 
 0.596
DIP2C
Disco interacting protein 2 homolog C.
      
 0.583
DLX5
Distal-less homeobox 5.
    
 
 0.577
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.575
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.