STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF4Transmembrane 4 L six family member 4. (202 aa)    
Predicted Functional Partners:
ABHD15
Abhydrolase domain containing 15.
      
 0.737
TM4SF20
Transmembrane 4 L six family member 20.
   
  
 0.736
CCDC116
Uncharacterized protein.
      
 0.700
EFCAB5
EF-hand calcium binding domain 5.
      
 0.697
GUCD1
Guanylyl cyclase domain containing 1.
      
 0.649
TVP23B
Golgi apparatus membrane protein TVP23 homolog.
      
 0.611
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
  
 0.577
GPA33
Glycoprotein A33.
      
 0.540
CRYBA2
Beta-crystallin A2; Crystallins are the dominant structural components of the vertebrate eye lens.
   
  
 0.530
ASGR1
Asialoglycoprotein receptor 1.
   
  
 0.530
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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