XPA protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIVM	ERCC1	ENSOCUP00000010688	ENSOCUP00000024644	Uncharacterized protein.	Uncharacterized protein.	0.962
BIVM	ERCC2	ENSOCUP00000010688	ENSOCUP00000028988	Uncharacterized protein.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.978
BIVM	ERCC3	ENSOCUP00000010688	ENSOCUP00000001942	Uncharacterized protein.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.990
BIVM	ERCC4	ENSOCUP00000010688	ENSOCUP00000012874	Uncharacterized protein.	ERCC excision repair 4, endonuclease catalytic subunit.	0.979
BIVM	ERCC6	ENSOCUP00000010688	ENSOCUP00000038361	Uncharacterized protein.	ERCC excision repair 6, chromatin remodeling factor.	0.991
BIVM	GTF2H5	ENSOCUP00000010688	ENSOCUP00000024773	Uncharacterized protein.	General transcription factor IIH subunit 5.	0.938
BIVM	RPA1	ENSOCUP00000010688	ENSOCUP00000042935	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.858
BIVM	RPA3	ENSOCUP00000010688	ENSOCUP00000000408	Uncharacterized protein.	Replication protein A3.	0.818
BIVM	XPA	ENSOCUP00000010688	ENSOCUP00000011935	Uncharacterized protein.	XPA, DNA damage recognition and repair factor.	0.990
BIVM	XPC	ENSOCUP00000010688	ENSOCUP00000009532	Uncharacterized protein.	XPC complex subunit, DNA damage recognition and repair factor.	0.911
ERCC1	BIVM	ENSOCUP00000024644	ENSOCUP00000010688	Uncharacterized protein.	Uncharacterized protein.	0.962
ERCC1	ERCC2	ENSOCUP00000024644	ENSOCUP00000028988	Uncharacterized protein.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.935
ERCC1	ERCC3	ENSOCUP00000024644	ENSOCUP00000001942	Uncharacterized protein.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.918
ERCC1	ERCC4	ENSOCUP00000024644	ENSOCUP00000012874	Uncharacterized protein.	ERCC excision repair 4, endonuclease catalytic subunit.	0.999
ERCC1	ERCC6	ENSOCUP00000024644	ENSOCUP00000038361	Uncharacterized protein.	ERCC excision repair 6, chromatin remodeling factor.	0.788
ERCC1	GTF2H5	ENSOCUP00000024644	ENSOCUP00000024773	Uncharacterized protein.	General transcription factor IIH subunit 5.	0.690
ERCC1	RPA1	ENSOCUP00000024644	ENSOCUP00000042935	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.690
ERCC1	RPA3	ENSOCUP00000024644	ENSOCUP00000000408	Uncharacterized protein.	Replication protein A3.	0.734
ERCC1	XPA	ENSOCUP00000024644	ENSOCUP00000011935	Uncharacterized protein.	XPA, DNA damage recognition and repair factor.	0.997
ERCC1	XPC	ENSOCUP00000024644	ENSOCUP00000009532	Uncharacterized protein.	XPC complex subunit, DNA damage recognition and repair factor.	0.692