STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UEVLDUEV and lactate/malate dehyrogenase domains. (470 aa)    
Predicted Functional Partners:
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.977
MVB12B
Multivesicular body subunit 12B.
    
 0.951
SPTY2D1
SPT2 chromatin protein domain containing 1.
 
 
 0.932
VPS36
Vacuolar protein sorting 36 homolog.
   
 0.901
ZFYVE19
Zinc finger FYVE-type containing 19.
    
 0.899
ZFYVE1
Zinc finger FYVE-type containing 1.
    
 0.899
LOC100343047
Ubiquitin-like domain-containing protein.
    
 0.846
ENSOCUP00000038446
Ubiquitin-like domain-containing protein.
    
 0.846
ENSOCUP00000044498
Ribosomal_L40e domain-containing protein.
    
 0.846
VPS37B
VPS37B subunit of ESCRT-I.
   
 0.838
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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