Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COPS2 | COPS3 | ENSOCUP00000005579 | ENSOCUP00000026534 | COP9 signalosome subunit 2. | COP9 signalosome subunit 3. | 0.999 |
COPS2 | COPS4 | ENSOCUP00000005579 | ENSOCUP00000030520 | COP9 signalosome subunit 2. | COP9 signalosome subunit 4. | 0.999 |
COPS2 | COPS6 | ENSOCUP00000005579 | ENSOCUP00000000260 | COP9 signalosome subunit 2. | COP9 signalosome subunit 6. | 0.999 |
COPS2 | COPS8 | ENSOCUP00000005579 | ENSOCUP00000038443 | COP9 signalosome subunit 2. | PCI domain-containing protein. | 0.978 |
COPS2 | CUL2 | ENSOCUP00000005579 | ENSOCUP00000012675 | COP9 signalosome subunit 2. | Cullin 2; Belongs to the cullin family. | 0.942 |
COPS2 | DDB1 | ENSOCUP00000005579 | ENSOCUP00000001429 | COP9 signalosome subunit 2. | Damage specific DNA binding protein 1. | 0.875 |
COPS2 | ENSOCUP00000041941 | ENSOCUP00000005579 | ENSOCUP00000041941 | COP9 signalosome subunit 2. | CSN8_PSD8_EIF3K domain-containing protein. | 0.978 |
COPS2 | NEDD8 | ENSOCUP00000005579 | ENSOCUP00000002526 | COP9 signalosome subunit 2. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins (By similarity). | 0.926 |
COPS2 | PPP1R42 | ENSOCUP00000005579 | ENSOCUP00000012111 | COP9 signalosome subunit 2. | Protein phosphatase 1 regulatory subunit 42. | 0.969 |
COPS2 | UBXN7 | ENSOCUP00000005579 | ENSOCUP00000010586 | COP9 signalosome subunit 2. | UBX domain-containing protein. | 0.591 |
COPS3 | COPS2 | ENSOCUP00000026534 | ENSOCUP00000005579 | COP9 signalosome subunit 3. | COP9 signalosome subunit 2. | 0.999 |
COPS3 | COPS4 | ENSOCUP00000026534 | ENSOCUP00000030520 | COP9 signalosome subunit 3. | COP9 signalosome subunit 4. | 0.999 |
COPS3 | COPS6 | ENSOCUP00000026534 | ENSOCUP00000000260 | COP9 signalosome subunit 3. | COP9 signalosome subunit 6. | 0.999 |
COPS3 | COPS8 | ENSOCUP00000026534 | ENSOCUP00000038443 | COP9 signalosome subunit 3. | PCI domain-containing protein. | 0.973 |
COPS3 | CUL2 | ENSOCUP00000026534 | ENSOCUP00000012675 | COP9 signalosome subunit 3. | Cullin 2; Belongs to the cullin family. | 0.905 |
COPS3 | DDB1 | ENSOCUP00000026534 | ENSOCUP00000001429 | COP9 signalosome subunit 3. | Damage specific DNA binding protein 1. | 0.917 |
COPS3 | ENSOCUP00000041941 | ENSOCUP00000026534 | ENSOCUP00000041941 | COP9 signalosome subunit 3. | CSN8_PSD8_EIF3K domain-containing protein. | 0.973 |
COPS3 | NEDD8 | ENSOCUP00000026534 | ENSOCUP00000002526 | COP9 signalosome subunit 3. | NEDD8; Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins (By similarity). | 0.946 |
COPS3 | PPP1R42 | ENSOCUP00000026534 | ENSOCUP00000012111 | COP9 signalosome subunit 3. | Protein phosphatase 1 regulatory subunit 42. | 0.964 |
COPS4 | COPS2 | ENSOCUP00000030520 | ENSOCUP00000005579 | COP9 signalosome subunit 4. | COP9 signalosome subunit 2. | 0.999 |
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