STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB6ATP binding cassette subfamily B member 6 (Langereis blood group). (856 aa)    
Predicted Functional Partners:
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.742
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.693
SLC25A38
Solute carrier family 25 member 38; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.678
UROD
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
  
 0.633
FXN
Frataxin.
   
  
 0.633
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2.
      
 0.620
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
   
  
 0.602
LOC100338129
Protein kinase domain-containing protein.
      
 0.593
U3KNZ7_RABIT
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.593
LOC100340551
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.593
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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