STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP11L1T-complex 11 like 1. (515 aa)    
Predicted Functional Partners:
CCDC47
Coiled-coil domain containing 47.
      
 0.700
MAN1A2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.680
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.650
COMMD9
COMM domain containing 9.
      
 0.650
CCDC34
Coiled-coil domain containing 34.
      
 0.649
CSTF3
Cleavage stimulation factor subunit 3.
      
 0.613
STRN3
Striatin 3.
      
 0.599
C15orf40
Chromosome 15 open reading frame 40.
      
 0.544
TRIM44
Tripartite motif containing 44.
      
 0.542
CCDC73
Coiled-coil domain containing 73.
      
 0.529
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.