STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRHD1Peptidyl-tRNA hydrolase domain containing 1. (140 aa)    
Predicted Functional Partners:
METTL15
Methyltransferase like 15.
      
 0.706
SLFN14
C-terminally truncated SLFN14 endoribonuclease; [Protein SLFN14]: Shows no ribosome-associated and endoribonuclease activities.
      
 0.700
DCAF16
DDB1 and CUL4 associated factor 16.
      
 0.698
PDZD11
PDZ domain-containing protein.
    
 
 0.686
PTRH1
Peptidyl-tRNA hydrolase 1 homolog.
      
 0.649
PARPBP
PARP1 binding protein.
   
  
 0.614
GNAL
G protein subunit alpha L.
   
 0.602
ENSOCUP00000034349
Uncharacterized protein.
   
 0.602
GNAS
GNAS complex locus.
   
 0.602
NPPC
Uncharacterized protein.
    
 0.575
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.