STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WASHC5WASH complex subunit 5. (1159 aa)    
Predicted Functional Partners:
WASHC4
WASH complex subunit 4.
  
 0.982
WASHC1
WH2 domain-containing protein.
   
 0.979
WASHC3
WASH complex subunit 3.
    
 0.974
LOC100343496
CAP-ZIP_m domain-containing protein.
   
 
 0.840
ZNF572
Zinc finger protein 572.
      
 0.820
PSMF1
Proteasome inhibitor subunit 1.
   
  
 0.735
SLF2
SMC5-SMC6 complex localization factor 2.
   
 
 0.720
CCDC93
KOG2701 domain-containing protein.
  
  
 0.684
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
  
 0.652
IQCA1
IQ motif containing with AAA domain 1.
      
 0.650
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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