Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALDH16A1 | SPG21 | ENSOCUP00000018035 | ENSOCUP00000013867 | Aldehyde dehydrogenase 16 family member A1. | AB hydrolase-1 domain-containing protein. | 0.597 |
MCP2 | SPG21 | ENSOCUP00000027402 | ENSOCUP00000013867 | Corticostatin-4; This peptide has antibiotic, anti-fungi and antiviral activity. It also inhibits corticotropin (ACTH) stimulated corticosterone production; Belongs to the alpha-defensin family. | AB hydrolase-1 domain-containing protein. | 0.541 |
NIPA1 | SPART | ENSOCUP00000009257 | ENSOCUP00000015243 | NIPA magnesium transporter 1. | Spartin. | 0.882 |
NIPA1 | SPG11 | ENSOCUP00000009257 | ENSOCUP00000005471 | NIPA magnesium transporter 1. | SPG11 vesicle trafficking associated, spatacsin. | 0.485 |
NIPA1 | SPG21 | ENSOCUP00000009257 | ENSOCUP00000013867 | NIPA magnesium transporter 1. | AB hydrolase-1 domain-containing protein. | 0.549 |
NIPA1 | SPG7 | ENSOCUP00000009257 | ENSOCUP00000009080 | NIPA magnesium transporter 1. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.601 |
P3H2 | SPG21 | ENSOCUP00000009476 | ENSOCUP00000013867 | Prolyl 3-hydroxylase 2. | AB hydrolase-1 domain-containing protein. | 0.445 |
SLC44A3 | SPG21 | ENSOCUP00000005452 | ENSOCUP00000013867 | Solute carrier family 44 member 3; Belongs to the CTL (choline transporter-like) family. | AB hydrolase-1 domain-containing protein. | 0.529 |
SPART | NIPA1 | ENSOCUP00000015243 | ENSOCUP00000009257 | Spartin. | NIPA magnesium transporter 1. | 0.882 |
SPART | SPG11 | ENSOCUP00000015243 | ENSOCUP00000005471 | Spartin. | SPG11 vesicle trafficking associated, spatacsin. | 0.707 |
SPART | SPG21 | ENSOCUP00000015243 | ENSOCUP00000013867 | Spartin. | AB hydrolase-1 domain-containing protein. | 0.599 |
SPART | SPG7 | ENSOCUP00000015243 | ENSOCUP00000009080 | Spartin. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.507 |
SPG11 | NIPA1 | ENSOCUP00000005471 | ENSOCUP00000009257 | SPG11 vesicle trafficking associated, spatacsin. | NIPA magnesium transporter 1. | 0.485 |
SPG11 | SPART | ENSOCUP00000005471 | ENSOCUP00000015243 | SPG11 vesicle trafficking associated, spatacsin. | Spartin. | 0.707 |
SPG11 | SPG21 | ENSOCUP00000005471 | ENSOCUP00000013867 | SPG11 vesicle trafficking associated, spatacsin. | AB hydrolase-1 domain-containing protein. | 0.785 |
SPG11 | SPG7 | ENSOCUP00000005471 | ENSOCUP00000009080 | SPG11 vesicle trafficking associated, spatacsin. | SPG7 matrix AAA peptidase subunit, paraplegin. | 0.797 |
SPG11 | TECPR2 | ENSOCUP00000005471 | ENSOCUP00000013581 | SPG11 vesicle trafficking associated, spatacsin. | Tectonin beta-propeller repeat containing 2. | 0.712 |
SPG21 | ALDH16A1 | ENSOCUP00000013867 | ENSOCUP00000018035 | AB hydrolase-1 domain-containing protein. | Aldehyde dehydrogenase 16 family member A1. | 0.597 |
SPG21 | MCP2 | ENSOCUP00000013867 | ENSOCUP00000027402 | AB hydrolase-1 domain-containing protein. | Corticostatin-4; This peptide has antibiotic, anti-fungi and antiviral activity. It also inhibits corticotropin (ACTH) stimulated corticosterone production; Belongs to the alpha-defensin family. | 0.541 |
SPG21 | NIPA1 | ENSOCUP00000013867 | ENSOCUP00000009257 | AB hydrolase-1 domain-containing protein. | NIPA magnesium transporter 1. | 0.549 |
page 1 of 2