STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG21AB hydrolase-1 domain-containing protein. (308 aa)    
Predicted Functional Partners:
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.785
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.692
TECPR2
Tectonin beta-propeller repeat containing 2.
      
 0.614
SPART
Spartin.
      
 0.599
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
      
 0.597
TM2D1
TM2 domain containing 1.
      
 0.557
NIPA1
NIPA magnesium transporter 1.
      
 0.549
MCP2
Corticostatin-4; This peptide has antibiotic, anti-fungi and antiviral activity. It also inhibits corticotropin (ACTH) stimulated corticosterone production; Belongs to the alpha-defensin family.
      
 0.541
SLC44A3
Solute carrier family 44 member 3; Belongs to the CTL (choline transporter-like) family.
      
 0.529
P3H2
Prolyl 3-hydroxylase 2.
      
 0.445
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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