STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL1Tubulin tyrosine ligase like 1. (494 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
   
 0.818
CEP41
Centrosomal protein 41.
      
 0.802
TPGS2
Tubulin polyglutamylase complex subunit 2.
   
 0.792
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.777
EDC3
Uncharacterized protein.
    
 
 0.745
ENSOCUP00000032474
LSM14 domain-containing protein.
    
 
 0.745
IQUB
IQ motif and ubiquitin domain containing.
   
  
 0.736
DNALI1
Dynein axonemal light intermediate chain 1.
  
  
 0.689
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
      
 0.686
TBC1D19
TBC1 domain family member 19.
   
 
 0.675
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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