STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNH8Potassium voltage-gated channel subfamily H member 8. (1108 aa)    
Predicted Functional Partners:
TMC5
Transmembrane channel-like protein.
   
  
 0.746
ELK4
ETS transcription factor ELK4.
      
 0.654
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.594
AGTRAP
Angiotensin II receptor associated protein.
      
 0.586
CLCNKA
Chloride channel protein ClC-Ka; Voltage-gated chloride channel. Chloride channels have several functions including the regulation of cell volume; membrane potential stabilization, signal transduction and transepithelial transport. May be important in urinary concentrating mechanisms; Belongs to the chloride channel (TC 2.A.49) family. CLCNKA subfamily.
   
  
 0.563
RASL12
RAS like family 12.
   
 
 0.557
PITPNM2
Phosphatidylinositol transfer protein membrane associated 2.
   
  
 0.516
FKBP9
Peptidylprolyl isomerase.
   
 
 0.504
RAB40B
RAB40B, member RAS oncogene family.
      
 0.495
SHISA9
Shisa family member 9.
      
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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