STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT4ATerminal nucleotidyltransferase 4A. (542 aa)    
Predicted Functional Partners:
ZCCHC7
Zinc finger CCHC-type containing 7.
   
 
 0.904
MTREX
Mtr4 exosome RNA helicase.
   
 0.903
MTPAP
Mitochondrial poly(A) polymerase.
   
  
 0.755
EXOSC10
Exosome component 10.
   
 
 0.746
TUT4
Terminal uridylyl transferase 4.
   
  
 0.734
CNOT9
CCR4-NOT transcription complex subunit 9.
    
   0.703
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 
 0.684
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 
 0.650
PAPOLG
Poly(A) polymerase gamma.
    
 
 0.618
PAPOLB
Uncharacterized protein.
    
 
 0.617
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.