GNGT1 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAI1	GNAI2	ENSOCUP00000000882	ENSOCUP00000019624	G protein subunit alpha i1.	G protein subunit alpha i2.	0.979
GNAI1	GNAI3	ENSOCUP00000000882	ENSOCUP00000004821	G protein subunit alpha i1.	G protein subunit alpha i3.	0.548
GNAI1	GNAS	ENSOCUP00000000882	ENSOCUP00000049763	G protein subunit alpha i1.	GNAS complex locus.	0.755
GNAI1	GNAT2	ENSOCUP00000000882	ENSOCUP00000004824	G protein subunit alpha i1.	G protein subunit alpha transducin 2.	0.787
GNAI1	GNB1	ENSOCUP00000000882	ENSOCUP00000008676	G protein subunit alpha i1.	G protein subunit beta 1.	0.959
GNAI1	GNB3	ENSOCUP00000000882	ENSOCUP00000011129	G protein subunit alpha i1.	G protein subunit beta 3.	0.955
GNAI1	GNB4	ENSOCUP00000000882	ENSOCUP00000000803	G protein subunit alpha i1.	G protein subunit beta 4.	0.954
GNAI1	GNGT1	ENSOCUP00000000882	ENSOCUP00000014636	G protein subunit alpha i1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.967
GNAI1	RHO	ENSOCUP00000000882	ENSOCUP00000011220	G protein subunit alpha i1.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity).	0.806
GNAI2	GNAI1	ENSOCUP00000019624	ENSOCUP00000000882	G protein subunit alpha i2.	G protein subunit alpha i1.	0.979
GNAI2	GNAI3	ENSOCUP00000019624	ENSOCUP00000004821	G protein subunit alpha i2.	G protein subunit alpha i3.	0.980
GNAI2	GNAS	ENSOCUP00000019624	ENSOCUP00000049763	G protein subunit alpha i2.	GNAS complex locus.	0.777
GNAI2	GNAT2	ENSOCUP00000019624	ENSOCUP00000004824	G protein subunit alpha i2.	G protein subunit alpha transducin 2.	0.776
GNAI2	GNB1	ENSOCUP00000019624	ENSOCUP00000008676	G protein subunit alpha i2.	G protein subunit beta 1.	0.984
GNAI2	GNB3	ENSOCUP00000019624	ENSOCUP00000011129	G protein subunit alpha i2.	G protein subunit beta 3.	0.984
GNAI2	GNB4	ENSOCUP00000019624	ENSOCUP00000000803	G protein subunit alpha i2.	G protein subunit beta 4.	0.972
GNAI2	GNGT1	ENSOCUP00000019624	ENSOCUP00000014636	G protein subunit alpha i2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.966
GNAI2	RHO	ENSOCUP00000019624	ENSOCUP00000011220	G protein subunit alpha i2.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G- proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by the arrestin SAG and terminates signaling (By similarity).	0.806
GNAI3	GNAI1	ENSOCUP00000004821	ENSOCUP00000000882	G protein subunit alpha i3.	G protein subunit alpha i1.	0.548
GNAI3	GNAI2	ENSOCUP00000004821	ENSOCUP00000019624	G protein subunit alpha i3.	G protein subunit alpha i2.	0.980