STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC8BKelch domain containing 8B. (354 aa)    
Predicted Functional Partners:
RIT2
Ras-like GTP binding protein.
      
 0.650
SLC7A5
Large neutral amino acids transporter small subunit 1.
      
 0.650
ERLIN1
ER lipid raft associated 1.
   
  
 0.615
ARRDC3
Arrestin domain containing 3.
   
  
 0.592
FRAT1
Uncharacterized protein.
   
  
 0.592
RPS6KA2
Non-specific serine/threonine protein kinase.
   
  
 0.544
ADORA3
Adenosine receptor A3; Receptor for adenosine. The activity of this receptor is mediated by G proteins which inhibits adenylyl cyclase.
   
  
 0.534
ZNF217
Zinc finger protein 217.
     
 0.519
TRAPPC6B
Trafficking protein particle complex 6B.
   
  
 0.511
SIPA1L2
Signal induced proliferation associated 1 like 2.
   
  
 0.506
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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