STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOVA1NOVA alternative splicing regulator 1. (507 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.818
RBFOX1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
      
 0.775
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.693
RBFOX2
RNA binding fox-1 homolog 2.
      
 0.651
DNM1
Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.617
MBNL1
Muscleblind like splicing regulator 1.
   
  
 0.587
SRSF9
Serine and arginine rich splicing factor 9.
    
 
 0.581
LRRC9
Leucine rich repeat containing 9.
      
 0.577
CELF3
Uncharacterized protein.
   
  
 0.573
SAMD12
Sterile alpha motif domain containing 12.
      
 0.547
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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