Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS28Ribosomal protein S28. (69 aa)    
Predicted Functional Partners:
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
RPS16
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
RPLP1
Ribosomal protein lateral stalk subunit P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.999
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
LOC100346996
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
RPLP2
60S acidic ribosomal protein P2; Plays an important role in the elongation step of protein synthesis.
   
 
 0.999
RPS21
Ribosomal protein S21.
   
 0.999
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
G1TPS1_RABIT
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.999
LOC100348511
S10_plectin domain-containing protein.
   
 0.999
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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