Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASK | RAB3D | ENSOCUP00000047524 | ENSOCUP00000016992 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | RAB3D, member RAS oncogene family. | 0.748 |
CASK | RIMS2 | ENSOCUP00000047524 | ENSOCUP00000047001 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Regulating synaptic membrane exocytosis 2. | 0.955 |
CASK | SNAP23 | ENSOCUP00000047524 | ENSOCUP00000009456 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.644 |
CASK | SYT1 | ENSOCUP00000047524 | ENSOCUP00000024326 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Synaptotagmin 1. | 0.520 |
CASK | VAMP2 | ENSOCUP00000047524 | ENSOCUP00000008737 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | V-SNARE coiled-coil homology domain-containing protein. | 0.645 |
CASK | VAMP3 | ENSOCUP00000047524 | ENSOCUP00000034375 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Vesicle associated membrane protein 3. | 0.645 |
CASK | VAMP8 | ENSOCUP00000047524 | ENSOCUP00000002050 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Vesicle associated membrane protein 8. | 0.662 |
CHM | RAB3D | ENSOCUP00000011031 | ENSOCUP00000016992 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | RAB3D, member RAS oncogene family. | 0.727 |
CHM | RABGGTA | ENSOCUP00000011031 | ENSOCUP00000002552 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab geranylgeranyltransferase subunit alpha. | 0.983 |
CHM | RPH3A | ENSOCUP00000011031 | ENSOCUP00000020208 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rabphilin 3A. | 0.424 |
RAB3D | CASK | ENSOCUP00000016992 | ENSOCUP00000047524 | RAB3D, member RAS oncogene family. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.748 |
RAB3D | CHM | ENSOCUP00000016992 | ENSOCUP00000011031 | RAB3D, member RAS oncogene family. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.727 |
RAB3D | RABGGTA | ENSOCUP00000016992 | ENSOCUP00000002552 | RAB3D, member RAS oncogene family. | Rab geranylgeranyltransferase subunit alpha. | 0.778 |
RAB3D | RIMS2 | ENSOCUP00000016992 | ENSOCUP00000047001 | RAB3D, member RAS oncogene family. | Regulating synaptic membrane exocytosis 2. | 0.989 |
RAB3D | RPH3A | ENSOCUP00000016992 | ENSOCUP00000020208 | RAB3D, member RAS oncogene family. | Rabphilin 3A. | 0.750 |
RAB3D | SNAP23 | ENSOCUP00000016992 | ENSOCUP00000009456 | RAB3D, member RAS oncogene family. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.709 |
RAB3D | SYT1 | ENSOCUP00000016992 | ENSOCUP00000024326 | RAB3D, member RAS oncogene family. | Synaptotagmin 1. | 0.718 |
RAB3D | VAMP2 | ENSOCUP00000016992 | ENSOCUP00000008737 | RAB3D, member RAS oncogene family. | V-SNARE coiled-coil homology domain-containing protein. | 0.787 |
RAB3D | VAMP3 | ENSOCUP00000016992 | ENSOCUP00000034375 | RAB3D, member RAS oncogene family. | Vesicle associated membrane protein 3. | 0.758 |
RAB3D | VAMP8 | ENSOCUP00000016992 | ENSOCUP00000002050 | RAB3D, member RAS oncogene family. | Vesicle associated membrane protein 8. | 0.759 |
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