STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGRF3Adhesion G protein-coupled receptor F3; Belongs to the G-protein coupled receptor 2 family. (987 aa)    
Predicted Functional Partners:
PPEF2
Serine/threonine-protein phosphatase with EF-hands.
   
  
 0.624
DMBX1
Diencephalon/mesencephalon homeobox 1.
   
  
 0.572
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.549
MED12L
Mediator complex subunit 12L.
   
  
 0.529
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
      
 0.528
STK38
Serine/threonine kinase 38.
      
 0.525
FMO1
Dimethylaniline monooxygenase [N-oxide-forming] 1; This protein is involved in the oxidative metabolism of a variety of xenobiotics such as drugs and pesticides. Form I catalyzes the N-oxygenation of secondary and tertiary amines.
      
 0.485
SLCO1B3
Solute carrier organic anion transporter family member.
      
 0.465
RASGRF2
Ras protein specific guanine nucleotide releasing factor 2.
   
  
 0.439
GRID1
Glutamate ionotropic receptor delta type subunit 1.
   
  
 0.436
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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