STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100008885IF rod domain-containing protein; Belongs to the intermediate filament family. (418 aa)    
Predicted Functional Partners:
KRT8
Keratin 8; Belongs to the intermediate filament family.
  
0.893
G1U3P5_RABIT
IF rod domain-containing protein.
   
 0.888
UNC79
Uncharacterized protein.
   
 0.730
DSP
Desmoplakin.
   
 0.491
G1TZC2_RABIT
Uncharacterized protein.
   
 0.468
ENSOCUP00000032071
RanBD1 domain-containing protein.
   
 0.468
KDM6B
Lysine demethylase 6B.
   
 0.468
KDM6A
Lysine demethylase 6A.
   
 0.464
LOC100355689
NACHT domain-containing protein.
   
 0.442
TEP1
Telomerase associated protein 1.
   
 0.442
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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