STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosomal associated membrane protein 2. (533 aa)    
Predicted Functional Partners:
LAMP1
Lysosomal associated membrane protein 1.
  
0.999
CD63
CD63 antigen; Functions as cell surface receptor for TIMP1 and plays a role in the activation of cellular signaling cascades. Plays a role in the activation of ITGB1 and integrin signaling, leading to the activation of AKT, FAK/PTK2 and MAP kinases. Promotes cell survival, reorganization of the actin cytoskeleton, cell adhesion, spreading and migration, via its role in the activation of AKT and FAK/PTK2. Plays a role in VEGFA signaling via its role in regulating the internalization of KDR/VEGFR2. Plays a role in intracellular vesicular transport processes, and is required for normal tr [...]
    
 0.977
CD68
CD68 molecule.
     
0.914
EEA1
Early endosome antigen 1.
      
 0.909
CTSD
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 
 0.897
BECN1
Uncharacterized protein.
      
 0.825
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.812
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 
 0.775
TFEB
BHLH domain-containing protein.
      
 0.774
SQSTM1
Sequestosome 1.
    
 
 0.764
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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