STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARHL1BarH like homeobox 1. (327 aa)    
Predicted Functional Partners:
ATOH1
Atonal bHLH transcription factor 1.
   
  
 0.769
POU4F3
POU domain protein.
   
  
 0.610
LHX5
LIM homeobox 5.
   
 
 0.577
LHX9
LIM homeobox 9.
   
 
 0.567
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.558
GFI1
Growth factor independent 1 transcriptional repressor.
    
 
 0.552
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.547
CLRN2
Clarin 2.
      
 0.525
NHLH1
Nescient helix-loop-helix 1.
   
 
 0.471
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
      
 0.467
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.