CHD4 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

CHD4

Uncharacterized protein. (1940 aa)

Predicted Functional Partners:

HDAC1

0.999

HDAC2

0.998

MTA2

0.992

GATAD2B

0.990

GATAD2A

0.989

CHD3

0.986

RBBP4

0.980

MTA1

0.977

RBBP7

0.946

ADNP

0.944

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADNP	CHD3	ENSOCUP00000012639	ENSOCUP00000018080	Activity dependent neuroprotector homeobox.	Chromodomain helicase DNA binding protein 3.	0.443
ADNP	CHD4	ENSOCUP00000012639	ENSOCUP00000020108	Activity dependent neuroprotector homeobox.	Uncharacterized protein.	0.944
ADNP	GATAD2A	ENSOCUP00000012639	ENSOCUP00000046188	Activity dependent neuroprotector homeobox.	GATA zinc finger domain containing 2A.	0.402
ADNP	GATAD2B	ENSOCUP00000012639	ENSOCUP00000044543	Activity dependent neuroprotector homeobox.	GATA zinc finger domain containing 2B.	0.484
CHD3	ADNP	ENSOCUP00000018080	ENSOCUP00000012639	Chromodomain helicase DNA binding protein 3.	Activity dependent neuroprotector homeobox.	0.443
CHD3	CHD4	ENSOCUP00000018080	ENSOCUP00000020108	Chromodomain helicase DNA binding protein 3.	Uncharacterized protein.	0.986
CHD3	GATAD2A	ENSOCUP00000018080	ENSOCUP00000046188	Chromodomain helicase DNA binding protein 3.	GATA zinc finger domain containing 2A.	0.993
CHD3	GATAD2B	ENSOCUP00000018080	ENSOCUP00000044543	Chromodomain helicase DNA binding protein 3.	GATA zinc finger domain containing 2B.	0.974
CHD3	HDAC1	ENSOCUP00000018080	ENSOCUP00000037903	Chromodomain helicase DNA binding protein 3.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.996
CHD3	HDAC2	ENSOCUP00000018080	ENSOCUP00000040151	Chromodomain helicase DNA binding protein 3.	Histone deacetylase 2.	0.994
CHD3	MTA1	ENSOCUP00000018080	ENSOCUP00000009759	Chromodomain helicase DNA binding protein 3.	Uncharacterized protein.	0.943
CHD3	MTA2	ENSOCUP00000018080	ENSOCUP00000007644	Chromodomain helicase DNA binding protein 3.	Metastasis associated 1 family member 2.	0.959
CHD3	RBBP4	ENSOCUP00000018080	ENSOCUP00000000814	Chromodomain helicase DNA binding protein 3.	WD_REPEATS_REGION domain-containing protein.	0.979
CHD3	RBBP7	ENSOCUP00000018080	ENSOCUP00000036697	Chromodomain helicase DNA binding protein 3.	RB binding protein 7, chromatin remodeling factor.	0.941
CHD4	ADNP	ENSOCUP00000020108	ENSOCUP00000012639	Uncharacterized protein.	Activity dependent neuroprotector homeobox.	0.944
CHD4	CHD3	ENSOCUP00000020108	ENSOCUP00000018080	Uncharacterized protein.	Chromodomain helicase DNA binding protein 3.	0.986
CHD4	GATAD2A	ENSOCUP00000020108	ENSOCUP00000046188	Uncharacterized protein.	GATA zinc finger domain containing 2A.	0.989
CHD4	GATAD2B	ENSOCUP00000020108	ENSOCUP00000044543	Uncharacterized protein.	GATA zinc finger domain containing 2B.	0.990
CHD4	HDAC1	ENSOCUP00000020108	ENSOCUP00000037903	Uncharacterized protein.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.999
CHD4	HDAC2	ENSOCUP00000020108	ENSOCUP00000040151	Uncharacterized protein.	Histone deacetylase 2.	0.998