Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGXT | AMT | ENSOCUP00000022506 | ENSOCUP00000047502 | Serine--pyruvate aminotransferase. | Aminomethyltransferase. | 0.982 |
AGXT | DLD | ENSOCUP00000022506 | ENSOCUP00000012612 | Serine--pyruvate aminotransferase. | Dihydrolipoyl dehydrogenase. | 0.918 |
AGXT | ENSOCUP00000049031 | ENSOCUP00000022506 | ENSOCUP00000049031 | Serine--pyruvate aminotransferase. | Uncharacterized protein. | 0.940 |
AGXT | GCSH | ENSOCUP00000022506 | ENSOCUP00000023181 | Serine--pyruvate aminotransferase. | Glycine cleavage system H protein, mitochondrial; The glycine cleavage system catalyzes the degradation of glycine. The H protein (GCSH) shuttles the methylamine group of glycine from the P protein (GLDC) to the T protein (GCST) (By similarity). Belongs to the GcvH family. | 0.940 |
AGXT | GLDC | ENSOCUP00000022506 | ENSOCUP00000003560 | Serine--pyruvate aminotransferase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.967 |
AGXT | LOC100338787 | ENSOCUP00000022506 | ENSOCUP00000020436 | Serine--pyruvate aminotransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.940 |
AGXT | LOC100351120 | ENSOCUP00000022506 | ENSOCUP00000019975 | Serine--pyruvate aminotransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.940 |
AGXT | SHMT1 | ENSOCUP00000022506 | ENSOCUP00000017814 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.991 |
AGXT | SHMT2 | ENSOCUP00000022506 | ENSOCUP00000019769 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase, mitochondrial; Catalyzes the cleavage of serine to glycine accompanied with the production of 5,10-methylenetetrahydrofolate, an essential intermediate for purine biosynthesis. Serine provides the major source of folate one-carbon in cells by catalyzing the transfer of one carbon from serine to tetrahydrofolate. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway via its role in glycine and tetrahydrofolate metabolism: thymidylate biosynthesis is required to prevent uracil accumulation in mtDNA. Also required for mitochondrial tran [...] | 0.990 |
AMT | AGXT | ENSOCUP00000047502 | ENSOCUP00000022506 | Aminomethyltransferase. | Serine--pyruvate aminotransferase. | 0.982 |
AMT | DLD | ENSOCUP00000047502 | ENSOCUP00000012612 | Aminomethyltransferase. | Dihydrolipoyl dehydrogenase. | 0.983 |
AMT | ENSOCUP00000049031 | ENSOCUP00000047502 | ENSOCUP00000049031 | Aminomethyltransferase. | Uncharacterized protein. | 0.990 |
AMT | GCSH | ENSOCUP00000047502 | ENSOCUP00000023181 | Aminomethyltransferase. | Glycine cleavage system H protein, mitochondrial; The glycine cleavage system catalyzes the degradation of glycine. The H protein (GCSH) shuttles the methylamine group of glycine from the P protein (GLDC) to the T protein (GCST) (By similarity). Belongs to the GcvH family. | 0.995 |
AMT | GLDC | ENSOCUP00000047502 | ENSOCUP00000003560 | Aminomethyltransferase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
AMT | GLUL | ENSOCUP00000047502 | ENSOCUP00000007630 | Aminomethyltransferase. | Glutamine synthetase. | 0.875 |
AMT | LOC100338787 | ENSOCUP00000047502 | ENSOCUP00000020436 | Aminomethyltransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.990 |
AMT | LOC100351120 | ENSOCUP00000047502 | ENSOCUP00000019975 | Aminomethyltransferase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.990 |
AMT | SHMT1 | ENSOCUP00000047502 | ENSOCUP00000017814 | Aminomethyltransferase. | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.982 |
AMT | SHMT2 | ENSOCUP00000047502 | ENSOCUP00000019769 | Aminomethyltransferase. | Serine hydroxymethyltransferase, mitochondrial; Catalyzes the cleavage of serine to glycine accompanied with the production of 5,10-methylenetetrahydrofolate, an essential intermediate for purine biosynthesis. Serine provides the major source of folate one-carbon in cells by catalyzing the transfer of one carbon from serine to tetrahydrofolate. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway via its role in glycine and tetrahydrofolate metabolism: thymidylate biosynthesis is required to prevent uracil accumulation in mtDNA. Also required for mitochondrial tran [...] | 0.983 |
DLD | AGXT | ENSOCUP00000012612 | ENSOCUP00000022506 | Dihydrolipoyl dehydrogenase. | Serine--pyruvate aminotransferase. | 0.918 |
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