STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNFX1Zinc finger NFX1-type containing 1. (1917 aa)    
Predicted Functional Partners:
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
   
  
 0.773
GAL3ST3
Galactose-3-O-sulfotransferase 3.
      
 0.722
PARP12
Poly(ADP-ribose) polymerase family member 12.
   
  
 0.701
DBF4B
DBF4 zinc finger B.
      
 0.696
CMPK2
Cytidine/uridine monophosphate kinase 2.
   
  
 0.680
USP18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
 0.679
NFX1
Nuclear transcription factor, X-box binding 1.
   
  
0.617
EIF2AK2
Interferon-induced double-stranded RNA-activated protein kinase.
   
  
 0.608
BRMS1L
BRMS1 like transcriptional repressor.
      
 0.603
RBM42
RNA binding motif protein 42.
      
 0.597
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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