Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C9orf72 | FUS | ENSOCUP00000005630 | ENSOCUP00000020899 | C9orf72-SMCR8 complex subunit. | FUS RNA binding protein. | 0.907 |
C9orf72 | HNRNPA2B1 | ENSOCUP00000005630 | ENSOCUP00000021456 | C9orf72-SMCR8 complex subunit. | Heterogeneous nuclear ribonucleoprotein A2/B1. | 0.565 |
C9orf72 | MATR3 | ENSOCUP00000005630 | ENSOCUP00000021695 | C9orf72-SMCR8 complex subunit. | Uncharacterized protein. | 0.705 |
C9orf72 | SOD1 | ENSOCUP00000005630 | ENSOCUP00000017459 | C9orf72-SMCR8 complex subunit. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family. | 0.877 |
C9orf72 | TARDBP | ENSOCUP00000005630 | ENSOCUP00000003504 | C9orf72-SMCR8 complex subunit. | TAR DNA binding protein. | 0.942 |
C9orf72 | UBQLN2 | ENSOCUP00000005630 | ENSOCUP00000017169 | C9orf72-SMCR8 complex subunit. | Ubiquilin 2. | 0.852 |
DROSHA | FUS | ENSOCUP00000000327 | ENSOCUP00000020899 | Drosha ribonuclease III. | FUS RNA binding protein. | 0.883 |
DROSHA | TARDBP | ENSOCUP00000000327 | ENSOCUP00000003504 | Drosha ribonuclease III. | TAR DNA binding protein. | 0.721 |
FUS | C9orf72 | ENSOCUP00000020899 | ENSOCUP00000005630 | FUS RNA binding protein. | C9orf72-SMCR8 complex subunit. | 0.907 |
FUS | DROSHA | ENSOCUP00000020899 | ENSOCUP00000000327 | FUS RNA binding protein. | Drosha ribonuclease III. | 0.883 |
FUS | HNRNPA2B1 | ENSOCUP00000020899 | ENSOCUP00000021456 | FUS RNA binding protein. | Heterogeneous nuclear ribonucleoprotein A2/B1. | 0.848 |
FUS | MATR3 | ENSOCUP00000020899 | ENSOCUP00000021695 | FUS RNA binding protein. | Uncharacterized protein. | 0.889 |
FUS | NONO | ENSOCUP00000020899 | ENSOCUP00000017243 | FUS RNA binding protein. | Uncharacterized protein. | 0.851 |
FUS | PRMT1 | ENSOCUP00000020899 | ENSOCUP00000023989 | FUS RNA binding protein. | Protein arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.849 |
FUS | SOD1 | ENSOCUP00000020899 | ENSOCUP00000017459 | FUS RNA binding protein. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family. | 0.859 |
FUS | TARDBP | ENSOCUP00000020899 | ENSOCUP00000003504 | FUS RNA binding protein. | TAR DNA binding protein. | 0.975 |
FUS | TNPO1 | ENSOCUP00000020899 | ENSOCUP00000011467 | FUS RNA binding protein. | Transportin 1. | 0.954 |
FUS | UBQLN2 | ENSOCUP00000020899 | ENSOCUP00000017169 | FUS RNA binding protein. | Ubiquilin 2. | 0.888 |
HNRNPA2B1 | C9orf72 | ENSOCUP00000021456 | ENSOCUP00000005630 | Heterogeneous nuclear ribonucleoprotein A2/B1. | C9orf72-SMCR8 complex subunit. | 0.565 |
HNRNPA2B1 | FUS | ENSOCUP00000021456 | ENSOCUP00000020899 | Heterogeneous nuclear ribonucleoprotein A2/B1. | FUS RNA binding protein. | 0.848 |
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