TRIM3 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

TRIM3

Hemopexin. (743 aa)

Predicted Functional Partners:

TRIM44

0.729

C6orf15

0.696

KIF21B

0.650

UBB

0.640

ENSOCUP00000030467

0.640

TRIM8

0.621

G1SK22_RABIT

0.620

G1TZL0_RABIT

0.620

TRIM16

0.611

CCDC9

0.580

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C6orf15	TRIM16	ENSOCUP00000027203	ENSOCUP00000049071	Chromosome 6 open reading frame 15.	Uncharacterized protein.	0.701
C6orf15	TRIM3	ENSOCUP00000027203	ENSOCUP00000014554	Chromosome 6 open reading frame 15.	Hemopexin.	0.696
CCDC9	TRIM3	ENSOCUP00000017358	ENSOCUP00000014554	Coiled-coil domain containing 9.	Hemopexin.	0.580
ENSOCUP00000030467	G1SK22_RABIT	ENSOCUP00000030467	ENSOCUP00000003131	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.855
ENSOCUP00000030467	G1TZL0_RABIT	ENSOCUP00000030467	ENSOCUP00000022533	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.855
ENSOCUP00000030467	TRIM16	ENSOCUP00000030467	ENSOCUP00000049071	Uncharacterized protein.	Uncharacterized protein.	0.548
ENSOCUP00000030467	TRIM3	ENSOCUP00000030467	ENSOCUP00000014554	Uncharacterized protein.	Hemopexin.	0.640
G1SK22_RABIT	ENSOCUP00000030467	ENSOCUP00000003131	ENSOCUP00000030467	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.855
G1SK22_RABIT	TRIM3	ENSOCUP00000003131	ENSOCUP00000014554	Ubiquitin-like domain-containing protein.	Hemopexin.	0.620
G1SK22_RABIT	UBB	ENSOCUP00000003131	ENSOCUP00000001111	Ubiquitin-like domain-containing protein.	Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...]	0.855
G1TZL0_RABIT	ENSOCUP00000030467	ENSOCUP00000022533	ENSOCUP00000030467	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.855
G1TZL0_RABIT	TRIM3	ENSOCUP00000022533	ENSOCUP00000014554	Ubiquitin-like domain-containing protein.	Hemopexin.	0.620
G1TZL0_RABIT	UBB	ENSOCUP00000022533	ENSOCUP00000001111	Ubiquitin-like domain-containing protein.	Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...]	0.855
KIF21B	TRIM3	ENSOCUP00000003132	ENSOCUP00000014554	Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Hemopexin.	0.650
TRIM16	C6orf15	ENSOCUP00000049071	ENSOCUP00000027203	Uncharacterized protein.	Chromosome 6 open reading frame 15.	0.701
TRIM16	ENSOCUP00000030467	ENSOCUP00000049071	ENSOCUP00000030467	Uncharacterized protein.	Uncharacterized protein.	0.548
TRIM16	TRIM3	ENSOCUP00000049071	ENSOCUP00000014554	Uncharacterized protein.	Hemopexin.	0.611
TRIM16	TRIM44	ENSOCUP00000049071	ENSOCUP00000047811	Uncharacterized protein.	Tripartite motif containing 44.	0.461
TRIM16	UBB	ENSOCUP00000049071	ENSOCUP00000001111	Uncharacterized protein.	Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...]	0.619
TRIM3	C6orf15	ENSOCUP00000014554	ENSOCUP00000027203	Hemopexin.	Chromosome 6 open reading frame 15.	0.696