STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRTGIg-like domain-containing protein. (135 aa)    
Predicted Functional Partners:
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 0.668
INKA2
Inka box actin regulator 2.
    
 
 0.556
IGSF11
Immunoglobulin superfamily member 11.
      
 0.543
JPT1
Uncharacterized protein.
      
 0.530
CBLN3
Cerebellin 3 precursor.
    
 0.528
IGSF9
Immunoglobulin superfamily member 9.
      
 0.528
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
    
 0.492
PTPRT
Protein tyrosine phosphatase receptor type T.
    
 0.471
PRSS56
Serine protease 56.
    
 0.470
NTN5
Netrin 5.
    
 0.463
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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