PLCXD1 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PLCXD1

Phosphatidylinositol specific phospholipase C X domain containing 1. (315 aa)

Predicted Functional Partners:

ASMTL

0.648

AKAP17A

0.632

PLCL2

0.601

BOLL

0.598

LDOC1

0.505

RDH14

0.491

NAP1L3

0.491

ZBED1

0.489

PLA2G3

0.485

ENPP3

0.483

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP17A	ASMTL	ENSOCUP00000016627	ENSOCUP00000018505	RRM domain-containing protein.	Uncharacterized protein.	0.648
AKAP17A	BOLL	ENSOCUP00000016627	ENSOCUP00000012017	RRM domain-containing protein.	Boule homolog, RNA binding protein.	0.544
AKAP17A	LDOC1	ENSOCUP00000016627	ENSOCUP00000025736	RRM domain-containing protein.	DUF4939 domain-containing protein.	0.446
AKAP17A	PLCXD1	ENSOCUP00000016627	ENSOCUP00000021387	RRM domain-containing protein.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.632
ASMTL	AKAP17A	ENSOCUP00000018505	ENSOCUP00000016627	Uncharacterized protein.	RRM domain-containing protein.	0.648
ASMTL	PLCXD1	ENSOCUP00000018505	ENSOCUP00000021387	Uncharacterized protein.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.648
BOLL	AKAP17A	ENSOCUP00000012017	ENSOCUP00000016627	Boule homolog, RNA binding protein.	RRM domain-containing protein.	0.544
BOLL	LDOC1	ENSOCUP00000012017	ENSOCUP00000025736	Boule homolog, RNA binding protein.	DUF4939 domain-containing protein.	0.489
BOLL	PLCXD1	ENSOCUP00000012017	ENSOCUP00000021387	Boule homolog, RNA binding protein.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.598
ENPP3	PLCXD1	ENSOCUP00000012418	ENSOCUP00000021387	Ectonucleotide pyrophosphatase/phosphodiesterase 3.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.483
LDOC1	AKAP17A	ENSOCUP00000025736	ENSOCUP00000016627	DUF4939 domain-containing protein.	RRM domain-containing protein.	0.446
LDOC1	BOLL	ENSOCUP00000025736	ENSOCUP00000012017	DUF4939 domain-containing protein.	Boule homolog, RNA binding protein.	0.489
LDOC1	PLCXD1	ENSOCUP00000025736	ENSOCUP00000021387	DUF4939 domain-containing protein.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.505
NAP1L3	PLCXD1	ENSOCUP00000025415	ENSOCUP00000021387	Nucleosome assembly protein 1 like 3; Belongs to the nucleosome assembly protein (NAP) family.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.491
PLA2G3	PLCXD1	ENSOCUP00000003567	ENSOCUP00000021387	Phospholipase A2 group III.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.485
PLCL2	PLCXD1	ENSOCUP00000033423	ENSOCUP00000021387	Phosphoinositide phospholipase C.	Phosphatidylinositol specific phospholipase C X domain containing 1.	0.601
PLCXD1	AKAP17A	ENSOCUP00000021387	ENSOCUP00000016627	Phosphatidylinositol specific phospholipase C X domain containing 1.	RRM domain-containing protein.	0.632
PLCXD1	ASMTL	ENSOCUP00000021387	ENSOCUP00000018505	Phosphatidylinositol specific phospholipase C X domain containing 1.	Uncharacterized protein.	0.648
PLCXD1	BOLL	ENSOCUP00000021387	ENSOCUP00000012017	Phosphatidylinositol specific phospholipase C X domain containing 1.	Boule homolog, RNA binding protein.	0.598
PLCXD1	ENPP3	ENSOCUP00000021387	ENSOCUP00000012418	Phosphatidylinositol specific phospholipase C X domain containing 1.	Ectonucleotide pyrophosphatase/phosphodiesterase 3.	0.483