STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYSMD4LysM domain-containing protein. (283 aa)    
Predicted Functional Partners:
FAM174B
Uncharacterized protein.
      
 0.890
LYSMD2
LysM domain-containing protein.
      
 0.765
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.704
METTL11B
Methyltransferase like 11B.
      
 0.649
GADL1
Glutamate decarboxylase like 1.
      
 0.617
HAUS4
Uncharacterized protein.
      
 0.616
PPP4R2
Serine/threonine-protein phosphatase 4 regulatory subunit 2.
   
  
 0.567
RHPN2
Rhophilin Rho GTPase binding protein 2.
      
 0.541
TMF1
TATA element modulatory factor 1.
   
  
 0.532
DCTN3
Dynactin subunit 3.
      
 0.529
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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