STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM homeobox 9. (388 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.793
LDB2
LIM domain binding 2.
    
 0.754
BSX
Brain specific homeobox.
   
 0.667
DBX1
Developing brain homeobox 1.
    
 
 0.622
FEZF1
FEZ family zinc finger 1.
  
 
 0.604
BARHL2
BarH like homeobox 2.
   
 
 0.600
NR5A1
Nuclear receptor subfamily 5 group A member 1.
   
  
 0.599
HCRT
Orexin; Neuropeptides that play a significant role in the regulation of food intake and sleep-wakefulness, possibly by coordinating the complex behavioral and physiologic responses of these complementary homeostatic functions. A broader role in the homeostatic regulation of energy metabolism, autonomic function, hormonal balance and the regulation of body fluids, is also suggested. Belongs to the orexin family.
      
 0.593
PAX2
Paired box 2.
    
 
 0.589
SSBP3
Single stranded DNA binding protein 3.
    
 
 0.588
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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