Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTR8 | ARPC4 | ENSOCUP00000035349 | ENSOCUP00000024742 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | 0.538 |
ACTR8 | DCTN2 | ENSOCUP00000035349 | ENSOCUP00000035872 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Dynactin subunit 2. | 0.528 |
ACTR8 | DCTN5 | ENSOCUP00000035349 | ENSOCUP00000007315 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Dynactin subunit 5. | 0.505 |
ACTR8 | DCTN6 | ENSOCUP00000035349 | ENSOCUP00000045645 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Dynactin subunit 6. | 0.512 |
ACTR8 | G1TYM7_RABIT | ENSOCUP00000035349 | ENSOCUP00000022193 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Uncharacterized protein. | 0.538 |
ACTR8 | ITSN2 | ENSOCUP00000035349 | ENSOCUP00000019448 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Intersectin 2. | 0.719 |
ACTR8 | MYSM1 | ENSOCUP00000035349 | ENSOCUP00000026655 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | Myb like, SWIRM and MPN domains 1. | 0.687 |
ACTR8 | RUVBL1 | ENSOCUP00000035349 | ENSOCUP00000032883 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.998 |
ACTR8 | SMARCB1 | ENSOCUP00000035349 | ENSOCUP00000038088 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1. | 0.581 |
ACTR8 | WDR1 | ENSOCUP00000035349 | ENSOCUP00000002202 | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | WD repeat domain 1. | 0.507 |
ARPC4 | ACTR8 | ENSOCUP00000024742 | ENSOCUP00000035349 | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.538 |
ARPC4 | G1TYM7_RABIT | ENSOCUP00000024742 | ENSOCUP00000022193 | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | Uncharacterized protein. | 0.554 |
ARPC4 | WDR1 | ENSOCUP00000024742 | ENSOCUP00000002202 | Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family. | WD repeat domain 1. | 0.491 |
DCTN2 | ACTR8 | ENSOCUP00000035872 | ENSOCUP00000035349 | Dynactin subunit 2. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.528 |
DCTN2 | DCTN5 | ENSOCUP00000035872 | ENSOCUP00000007315 | Dynactin subunit 2. | Dynactin subunit 5. | 0.999 |
DCTN2 | DCTN6 | ENSOCUP00000035872 | ENSOCUP00000045645 | Dynactin subunit 2. | Dynactin subunit 6. | 0.999 |
DCTN2 | G1TYM7_RABIT | ENSOCUP00000035872 | ENSOCUP00000022193 | Dynactin subunit 2. | Uncharacterized protein. | 0.552 |
DCTN5 | ACTR8 | ENSOCUP00000007315 | ENSOCUP00000035349 | Dynactin subunit 5. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.505 |
DCTN5 | DCTN2 | ENSOCUP00000007315 | ENSOCUP00000035872 | Dynactin subunit 5. | Dynactin subunit 2. | 0.999 |
DCTN5 | DCTN6 | ENSOCUP00000007315 | ENSOCUP00000045645 | Dynactin subunit 5. | Dynactin subunit 6. | 0.999 |
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