STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCR8SMCR8-C9orf72 complex subunit. (930 aa)    
Predicted Functional Partners:
WDR41
WD_REPEATS_REGION domain-containing protein.
    
 0.999
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.997
RAB39B
RAB39B, member RAS oncogene family (Predicted).
    
 0.970
TBK1
TANK binding kinase 1.
   
 0.939
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.930
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.928
TANK
TRAF family member associated NFKB activator.
     
 0.912
ATG101
Autophagy related 101.
     
 0.852
ENSOCUP00000035029
Uncharacterized protein.
    
 
 0.809
FNIP1
Folliculin interacting protein 1.
   
 
 0.806
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.