STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF4C1q and TNF related 4. (173 aa)    
Predicted Functional Partners:
RIPOR2
RHO family interacting cell polarization regulator 2.
    
 0.588
FAM180B
Family with sequence similarity 180 member B.
      
 0.547
EML1
EMAP like 1.
    
 0.503
VIT
Vitrin.
    
 0.489
PAMR1
Peptidase domain containing associated with muscle regeneration 1; Belongs to the peptidase S1 family.
    
 0.451
TP53I13
Tumor protein p53 inducible protein 13.
    
 
 0.438
TEP1
Telomerase associated protein 1.
    
 0.423
LOC100355689
NACHT domain-containing protein.
    
 0.420
OTOG
Otogelin.
    
 0.419
TTLL1
Tubulin tyrosine ligase like 1.
      
 0.408
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.