STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH3G-patch domain containing 3. (445 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
   
    0.975
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
  
 0.598
LTBP2
Latent transforming growth factor beta binding protein 2.
      
 0.559
NSD3
Nuclear receptor binding SET domain protein 3.
      
 0.554
EAF1
ELL associated factor 1.
   
  
 0.547
NEK6
Protein kinase domain-containing protein.
   
  
 0.546
EFCAB1
EF-hand calcium binding domain 1.
      
 0.545
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.545
FKBP14
Peptidylprolyl isomerase.
    
 
 0.519
ENTPD3
Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family.
      
 0.497
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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