STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATC1Spermatogenesis and centriole associated 1. (646 aa)    
Predicted Functional Partners:
SPATA9
Spermatogenesis associated 9.
      
 0.848
FHL5
Four and a half LIM domains 5.
      
 0.769
ODF1
Outer dense fiber of sperm tails 1.
      
 0.681
CBY2
Spermatid associated.
      
 0.680
TSSK3
Testis specific serine kinase 3.
   
  
 0.653
KLHL10
Kelch like family member 10.
     
 0.614
RNF17
Ring finger protein 17.
      
 0.598
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
   
  
 0.598
SPZ1
Uncharacterized protein.
      
 0.569
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.543
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.