STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM7Small integral membrane protein 7. (75 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.962
COG3
Component of oligomeric golgi complex 3.
    
 0.960
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.959
COG2
Component of oligomeric golgi complex 2.
   
 0.954
COG5
Component of oligomeric golgi complex 5.
    
 0.945
COG1
Component of oligomeric golgi complex 1.
    
 0.944
COG7
Component of oligomeric golgi complex 7.
    
 0.905
TPX2
TPX2 microtubule nucleation factor.
    
 0.858
GABPB2
GA binding protein transcription factor subunit beta 2.
     
 0.813
UNC13C
Unc-13 homolog C.
      
 0.770
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.