STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD1GATA zinc finger domain containing 1. (399 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
    
 
 0.968
KDM5A
Transporter.
    
 
 0.850
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.774
ANKIB1
RBR-type E3 ubiquitin transferase.
 
 
  
 0.666
DTWD2
DTW domain containing 2.
      
 0.616
MSL1
MSL complex subunit 1.
      
 0.605
MYPN
Myopalladin.
      
 0.598
HDAC2
Histone deacetylase 2.
    
 
 0.579
G1TZ09_RABIT
Sin3a_C domain-containing protein.
    
 
 0.574
ENSOCUP00000045227
Uncharacterized protein.
    
 
 0.574
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.