STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A4Solute carrier family 38 member 4. (532 aa)    
Predicted Functional Partners:
SFMBT2
Scm like with four mbt domains 2.
   
  
 0.842
G1T017_RABIT
Amino acid transporter.
    
 
 0.755
SMOC1
SPARC related modular calcium binding 1.
      
 0.753
SLC7A1
Solute carrier family 7 member 1.
   
 
 0.738
LOC100359182
Amino acid transporter.
    
 
 0.737
SLC1A3
Amino acid transporter.
    
 
 0.730
SLC1A2
Amino acid transporter.
    
 
 0.680
SLC1A5
Neutral amino acid transporter B(0); Sodium-dependent amino acids transporter that has a broad substrate specificity, with a preference for zwitterionic amino acids. It accepts as substrates all neutral amino acids, including glutamine, asparagine, and branched-chain and aromatic amino acids, and excludes methylated, anionic, and cationic amino acids.
    
 
 0.679
SLC1A6
Amino acid transporter.
    
 
 0.676
SLC1A7
Amino acid transporter.
    
 
 0.672
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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