STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ2BPPDZ domain-containing protein. (145 aa)    
Predicted Functional Partners:
RRBP1
Ribosome binding protein 1.
    
 0.825
ADNP2
ADNP homeobox 2.
      
 0.699
SNTA1
Alpha-1-syntrophin; Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the extracellular matrix via dystrophin glycoprotein complex. Plays an important role in synapse formation and in the organization of UTRN and acetylcholine receptors at the neuromuscular synapse. Binds to phosphatidylinositol 4,5-bisphosphate (By similarity).
      
 0.583
CATSPER2
Cation channel sperm associated 2.
    
 0.575
RRP36
Ribosomal RNA processing 36.
      
 0.572
GDAP1L1
Ganglioside induced differentiation associated protein 1 like 1.
      
 0.569
ESYT1
Extended synaptotagmin 1.
    
 
 0.564
CATSPERG
Uncharacterized protein.
    
 0.550
IFT80
Intraflagellar transport 80.
   
 0.536
IFT57
Intraflagellar transport 57.
    
 0.533
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.