STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HERC6HECT and RLD domain containing E3 ubiquitin protein ligase family member 6. (998 aa)    
Predicted Functional Partners:
ISG15
ISG15 ubiquitin like modifier.
   
 0.918
IFIH1
Interferon induced with helicase C domain 1.
   
 
 0.856
DDX58
DExD/H-box helicase 58.
   
 
 0.817
USP18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
 0.815
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.795
EIF2AK2
Interferon-induced double-stranded RNA-activated protein kinase.
   
 
 0.759
OAS1
2'-5'-oligoadenylate synthetase 1.
   
  
 0.740
IFI44
Interferon induced protein 44.
   
  
 0.732
DDX60
DExD/H-box helicase 60.
   
  
 0.719
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.693
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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