STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKAL2ALK and LTK ligand 2. (152 aa)    
Predicted Functional Partners:
ALK
Tyrosine-protein kinase receptor.
    
 
 0.880
LTK
Tyrosine-protein kinase receptor.
    
 
 0.775
ERGIC1
Uncharacterized protein.
      
 0.489
CHPF2
Hexosyltransferase.
   
    0.474
CHPF
Hexosyltransferase.
   
    0.474
ROS1
Tyrosine-protein kinase receptor.
    
 
 0.471
PKP1
Plakophilin 1.
      
 0.468
HOXA7
Homeobox domain-containing protein.
      
 0.439
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.