STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7ARibosomal RNA processing 7 homolog A. (300 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
   
 0.998
UTP18
UTP18 small subunit processome component.
   
 0.998
BMS1
BMS1 ribosome biogenesis factor.
   
 0.998
WDR43
WD repeat domain 43.
   
 0.997
WDR36
WD repeat domain 36.
   
 0.997
PDCD11
Programmed cell death 11.
   
 0.997
WDR75
WD repeat domain 75.
   
 0.997
HEATR1
HEAT repeat containing 1.
   
 0.997
KRR1
KRR1 small subunit processome component homolog.
   
 0.997
WDR3
WD repeat domain 3.
   
 0.996
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.