STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDM1Mdm1 nuclear protein. (748 aa)    
Predicted Functional Partners:
SNX13
Sorting nexin 13.
      
 0.650
SNX25
Sorting nexin 25.
      
 0.620
NOL4
Nucleolar protein 4.
   
  
 0.607
STARD3NL
STARD3 N-terminal like.
      
 0.551
SNX19
Sorting nexin 19.
      
 0.548
RHBDD1
Rhomboid domain containing 1.
   
  
 0.536
CEP162
Centrosomal protein 162.
   
  
 0.485
DYRK2
Dual specificity tyrosine phosphorylation regulated kinase 2.
      
 0.465
ZC3H12C
Zinc finger CCCH-type containing 12C.
   
  
 0.465
RAPGEF4
Rap guanine nucleotide exchange factor 4.
      
 0.404
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.