STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF3Membrane associated ring-CH-type finger 3. (265 aa)    
Predicted Functional Partners:
MARCHF10
Membrane associated ring-CH-type finger 10.
      
 0.749
MARCHF7
Membrane associated ring-CH-type finger 7.
      
 0.730
RNFT2
Ring finger protein, transmembrane 2.
      
 0.697
MARCHF5
Membrane associated ring-CH-type finger 5.
   
  
 0.667
STX6
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.629
RNF167
Ring finger protein 167.
   
  
 0.614
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.597
RNF152
Ring finger protein 152.
      
 0.530
G1T104_RABIT
RING-CH-type domain-containing protein.
      
0.420
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.413
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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