STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOCUP00000029906SMC hinge domain-containing protein. (685 aa)    
Predicted Functional Partners:
STAG1
Stromal antigen 1.
   
 0.977
SMC3
Structural maintenance of chromosomes protein.
   
0.972
RAD21
RAD21 cohesin complex component.
   
 0.969
NIPBL
Nipped-B protein.
   
 0.941
STAG2
Stromal antigen 2 isoform a (Predicted).
   
 0.937
REC8
REC8 meiotic recombination protein.
   
 0.930
PDS5A
PDS5 cohesin associated factor A.
   
 0.897
STAG3
Stromal antigen 3.
   
 0.890
PDS5B
PDS5 cohesin associated factor B.
   
 0.885
NCAPG
Non-SMC condensin I complex subunit G.
   
 0.850
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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