STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDE1Cold shock domain containing E1. (851 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.881
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.796
NF1
Neurofibromin 1.
   
 0.771
ITSN1
Intersectin 1.
    
 0.764
RASA1
RAS p21 protein activator 1.
   
 0.738
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.733
UBAP2L
Ubiquitin associated protein 2 like.
   
 0.726
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.712
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.708
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.708
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.