STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D25TBC1 domain family member 25. (672 aa)    
Predicted Functional Partners:
TBC1D14
TBC1 domain family member 14.
      
 0.813
RAB33A
RAB33A, member RAS oncogene family.
     
 0.809
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.785
RAB7B
Uncharacterized protein.
   
 0.775
ENSOCUP00000041191
Uncharacterized protein.
   
 0.767
CDC16
Cell division cycle 16.
      
 0.765
GABARAP
Gamma-aminobutyric acid receptor-associated protein; Ubiquitin-like modifier that plays a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family.
   
 0.753
TBC1D5
TBC1 domain family member 5.
      
 0.742
TBC1D2B
TBC1 domain family member 2B.
      
 0.737
TBC1D9B
TBC1 domain family member 9B.
   
  
 0.679
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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